MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Citrobacter koseri
19428wH4_BL23
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 33
bases: 4,826,282 bps
CDS: 4,469
rRNA: 19
tRNA: 81
tmRNA: 1
Total number of protein coding genes annotated/found:
4,420
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5017|JADGKP010000001.1
MBF0733612.1
Genome Viewer
NA
AA
9621/3207
1632161-1622541
colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB
SEQF5017|JADGKP010000001.1
MBF0733245.1
Genome Viewer
NA
AA
9492/3164
1229600-1239091
yersiniabactin polyketide synthase HMWP1
SEQF5017|JADGKP010000001.1
MBF0733604.1
Genome Viewer
NA
AA
6501/2167
1608374-1601874
colibactin non-ribosomal peptide synthetase ClbJ
SEQF5017|JADGKP010000001.1
MBF0733603.1
Genome Viewer
NA
AA
6465/2155
1601863-1595399
colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK
SEQF5017|JADGKP010000001.1
MBF0733244.1
Genome Viewer
NA
AA
6108/2036
1223405-1229512
yersiniabactin non-ribosomal peptide synthetase HMWP2
SEQF5017|JADGKP010000004.1
MBF0735939.1
Genome Viewer
NA
AA
5529/1843
439428-433900
autotransporter domain-containing protein
SEQF5017|JADGKP010000001.1
MBF0734186.1
Genome Viewer
NA
AA
4935/1645
2272016-2267082
alpha-2-macroglobulin family protein
SEQF5017|JADGKP010000001.1
MBF0733606.1
Genome Viewer
NA
AA
4797/1599
1616296-1611500
colibactin non-ribosomal peptide synthetase ClbH
SEQF5017|JADGKP010000001.1
MBF0732570.1
Genome Viewer
NA
AA
4470/1490
506277-510746
chromosome partition protein MukB
SEQF5017|JADGKP010000003.1
MBF0735497.1
Genome Viewer
NA
AA
4461/1487
617552-622012
glutamate synthase large subunit
SEQF5017|JADGKP010000001.1
MBF0733600.1
Genome Viewer
NA
AA
4368/1456
1592445-1588078
colibactin non-ribosomal peptide synthetase ClbN
SEQF5017|JADGKP010000008.1
MBF0736459.1
Genome Viewer
NA
AA
4224/1408
19557-15334
DNA-directed RNA polymerase subunit beta'
SEQF5017|JADGKP010000001.1
MBF0733206.1
Genome Viewer
NA
AA
4068/1356
1184810-1180743
nitrite reductase small subunit NirD
SEQF5017|JADGKP010000008.1
MBF0736460.1
Genome Viewer
NA
AA
4029/1343
23662-19634
DNA-directed RNA polymerase subunit beta
SEQF5017|JADGKP010000001.1
MBF0732652.1
Genome Viewer
NA
AA
3963/1321
600570-596608
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
SEQF5017|JADGKP010000001.1
MBF0732535.1
Genome Viewer
NA
AA
3924/1308
462915-466838
DNA translocase FtsK
SEQF5017|JADGKP010000001.1
MBF0733088.1
Genome Viewer
NA
AA
3903/1301
1055932-1052030
ATP-dependent RNA helicase HrpA
SEQF5017|JADGKP010000001.1
MBF0734214.1
Genome Viewer
NA
AA
3888/1296
2305750-2301863
phosphoribosylformylglycinamidine synthase
SEQF5017|JADGKP010000001.1
MBF0732232.1
Genome Viewer
NA
AA
3885/1295
122418-126302
enterobactin non-ribosomal peptide synthetase EntF
SEQF5017|JADGKP010000003.1
MBF0735524.1
Genome Viewer
NA
AA
3801/1267
651703-647903
AsmA2 domain-containing protein YhdP
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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